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RNAseq Workshop
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Table of contents
1
Getting started
2
Introduction
3
Planning an RNAseq Experiment
4
Experimental Design
5
Library Preparation
6
Pipeline Overview
FASTQ files
Detour: demultiplexing
An example dataset
Alignment / mapping
Counting transcripts
Where / how can I run an RNA-seq pipeline ?
7
Differential Expression
8
Additional Analysis
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Mastering Bulk RNA-seq: Plan, Analyse and Interpret
8
Additional Analysis
Functional Enrichment:
Biocommons - Functional Enrichment
7
Differential Expression
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8
Additional Analysis
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