1 Getting started
All communications and important links will be in this Drive Document
Instructors: Adele Barugahare, Nitika Kandhari, Scott Coutts, Andrew Perry, Paul Harrison, Laura Perlaza-Jimenez
1.1 Schedule
This workshop is 2 sessions long, each 4 hours
First Day
| Time | Content |
|---|---|
| 10:00 | Getting started and introduction |
| 10:10 | Planning an RNAseq Experiment |
| 11:00 | Experimental Design |
| 11:20 | 00:10 Break |
| 11:30 | Library Preparation |
| 12:40 | 00:20 Lunch Break |
| 13:00 | Pipeline Overview |
| 14:00 | End of first session |
Second Day
| Time | Content |
|---|---|
| 10:00 | Pipeline Overview |
| 11:20 | 00:10 Break |
| 11:30 | Pipeline Overview |
| 12:00 | Differential Expression |
| 12:40 | 00:20 Lunch Break |
| 13:00 | Differential Expression |
| 14:00 | End of second session |
1.2 Summary
This workshop is aimed at researchers who are looking to design, analyze, and interpret bulk RNA-seq experiments without the need for coding. It is particularly suitable for those who want to:
- Develop a strong understanding of RNA-seq experiment planning and data analysis.
- Use web-based tools to process and interpret RNA-seq data.
- Gain confidence in making informed decisions about experimental design and data interpretation.
Contact
Please email bioinformatics.platform@monash.edu for more information